Pairwise Alignments

Query, 556 a.a., peptide ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., acetate kinase (RefSeq) from Shewanella sp. ANA-3

 Score = 95.9 bits (237), Expect = 4e-24
 Identities = 120/498 (24%), Positives = 219/498 (43%), Gaps = 67/498 (13%)

Query: 44  NFNPYLATNLRT---TTDFIYEPLVVFNEMKGNTPVFRLAESYKMADDLMSVTFDIRKGV 100
           +FNP L T+  T   T+  IY  LV ++ + G   V  LA S+  +DD +S  F +R+ V
Sbjct: 43  SFNPQLVTSGTTIDATSHQIYSRLVDYDALSGQL-VPALATSWAESDDGLSYRFTLRENV 101

Query: 101 KWSDGEAFT------ADDVVYSFGLLKAK------------PELDQRGINKWVTSVEKVD 142
           K+     FT      ADDV++SF  +  K            P     G ++ V SVEK++
Sbjct: 102 KFQHSSRFTPSRDFNADDVLFSFNRIIDKHHPYHGVSRTGYPFFQSIGFSEQVKSVEKIN 161

Query: 143 EYKVRFRLSEAN----SNVPYEISLIPIVAEHVWKDVK--DPTTFTNENPVGTGPFTVID 196
           +++V FRL+  +    SN+  + ++I + +E+  + +    P    +   +GTGPFT++ 
Sbjct: 162 DHEVIFRLARKDASFLSNLATDFAVI-LSSEYADQQLALGHPENL-DHFAIGTGPFTLVH 219

Query: 197 TFTPQLYIQCRNPNYWDAANLEVDCLRVPQIANNDQLLGKIVNSELDWTSSFVPDIDRTY 256
               +     RNP++W     +VD L       +   L K++    D + S +P      
Sbjct: 220 YAKNEYIRYRRNPDFW-GEPAKVDMLVYDITPKSTVRLAKLIAG--DCSVSALPKAGELP 276

Query: 257 AAANPNHHYWYPAAGTQAFMVNFKNPDPAKKEALDNVDFRRAFSMALDRQTIIDIAFYGS 316
                         G       F      +K  LD+V  RRA + A+D+Q I+   +   
Sbjct: 277 VIKQHEQLNIESQPGLNVAFWAFN----TQKPPLDDVRVRRALAYAVDKQNILRAVYQ-- 330

Query: 317 GTVNDFASGLGYAFEA-WSDEATHKKYKGFNTYDVEGSKKLLAKAGFKDVNGDGFVETPS 375
              N     +G    A W+ ++  K       Y+ + ++ LL +AG K ++ D +   P 
Sbjct: 331 ---NTAIEAIGVLPPASWAYDSNKK----LLDYNPQKARDLLKEAGIKHLSIDIWA-MPV 382

Query: 376 GKSFELLIQSPNGWTDFNNTVQLAVEQLQEVGIKAKARTPEFAVYNQAMLEGTYDVAYTN 435
            +++     +PN       T +L    L  +G+K    + +++V++Q +    YD     
Sbjct: 383 ARAY-----NPNAL----KTAELIQSDLANIGVKVNIISYDWSVFSQRLSRDEYDSVLIG 433

Query: 436 Y-FHGADPFTYWNSGYN-SALQSGDGMPRFAMHYFTDKKLDGLLDSFYKTADKNEQLAIA 493
           +    +DP  ++    + SA+QS +   R+      +K+ D +LD   + + + E+  I 
Sbjct: 434 WNADNSDPDNFFTPLLSCSAMQSNNNRSRWC-----NKEFDAILDRAREVSTQAERKEIY 488

Query: 494 HGIQKIIAENQVTIPVMS 511
              +  +AE    +P++S
Sbjct: 489 QEAEAFLAEQ---VPMLS 503