Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., peptide ABC transporter permease from Azospirillum brasilense Sp245

 Score =  161 bits (407), Expect = 2e-44
 Identities = 107/338 (31%), Positives = 171/338 (50%), Gaps = 24/338 (7%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + L R+S      L    L F++ R +PGDP+ +        + PER+  ++  LG    
Sbjct: 4   FILTRVSLVIPTFLGVTFLTFLLIRLVPGDPIEVRVGERG--IPPERLLELRHELGLDRP 61

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
            W+ Q+L YI  +L  +LG S+       +E +   F  +L LA  A++ +  +G   GI
Sbjct: 62  LWH-QFLDYIGGVLQGDLGVSLVTRNSVFSEFVT-LFPATLELAALAMLFATVVGLPAGI 119

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP--------------T 168
            AA +RGS +D  +    L   ++P     +L +  F++GL W P              T
Sbjct: 120 IAAVRRGSIFDHGVMGISLTGYSMPIFWWGLLLILFFSVGLGWTPVSGRLDLLYYVEPVT 179

Query: 169 GYAY--TAGTTPDWTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYIT 226
           G+    T         W+ +    +H +LP+     V +       R+ M+ +L EDYI 
Sbjct: 180 GFMLIDTLMAGEYGAFWSAL----HHLILPMIVLGTVPLAVVARMTRSAMLEVLGEDYIR 235

Query: 227 MAKGKGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAI 286
            AK KGL+  RV+  +A RNAL+P VT + + +G  +GG ++ E IF++PG+G  L  +I
Sbjct: 236 TAKAKGLAGKRVIGLHALRNALIPVVTVIGLQVGTLLGGAILTETIFSWPGVGKWLIESI 295

Query: 287 TARDYQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
             RDY  LQG +L++   ++  NLL D+LY VL+PR+R
Sbjct: 296 NRRDYPALQGGVLLIATTVMTVNLLVDVLYGVLNPRIR 333