Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  144 bits (363), Expect = 3e-39
 Identities = 101/322 (31%), Positives = 164/322 (50%), Gaps = 22/322 (6%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + L RL      +L   T  F++ R M GDP  +M       V  + ++A ++  G ++ 
Sbjct: 4   FVLVRLMRAVITILAVVTFAFVVLR-MSGDPAQVMLG---PDVPQDAVDAFRKTWG-LDQ 58

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P ++QYL YIKSI T + G S++    +++ +L      +L L   A+I+   IG   G+
Sbjct: 59  PIWIQYLAYIKSIFTGDFGVSMRDKASALHLVLERVPA-TLQLTLPALILKLMIGIPAGV 117

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTS 182
           +AA  R S  D  +    ++   VP  V+ ++ +  F++ L   P+G             
Sbjct: 118 YAALHRQSFADRGVITLAIIGFTVPSFVMGLVLVLIFSVLLGVLPSGG------------ 165

Query: 183 WAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNY 242
               +D   H +LP    SI  IG      R+ MI +L + YI  A  KGL    V++++
Sbjct: 166 ----QDTWMHGILPTITMSIGGIGILARFSRSAMIEVLGQPYIRTASAKGLKWRDVIWSH 221

Query: 243 AARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMT 302
           A  NA +P VT +   +G  I G +++E IF++PG+G +L  +++ RD  V+Q  LLI+ 
Sbjct: 222 ALPNAAVPIVTIVGFMVGSLIAGAVVVESIFSWPGIGRLLIVSVSNRDLAVVQCILLIIA 281

Query: 303 LFMLFFNLLADMLYVVLDPRLR 324
             M+  NL+ D+LY  LDPRLR
Sbjct: 282 AAMVMSNLVVDLLYGWLDPRLR 303