Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., ABC transporter permease from Rahnella sp. WP5

 Score =  150 bits (380), Expect = 3e-41
 Identities = 95/314 (30%), Positives = 166/314 (52%), Gaps = 24/314 (7%)

Query: 15  LLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWYVQYLTYIKS 74
           LL  + L F++ RA+PGDP  ++      + TPE I  ++   G ++ P + QYL ++++
Sbjct: 18  LLGISILTFVMVRAIPGDPARILLG---VRSTPEAIARIRVQYG-LDLPVWQQYLYFLRN 73

Query: 75  ILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAAWKRGSRYDT 134
           +   E+G S+  Y +    L+      +L+L   +V+++      L   AA  RG   D 
Sbjct: 74  LFHGEMGKSL-IYRVDTLTLIMSRIEPTLYLVLGSVLLAMLFTVPLAAGAARHRGQLADQ 132

Query: 135 FITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP-TGYAYTAGTTPDWTSWAFIKDVG--- 190
            I     +   +P   +A++ +  F++ L WFP +GY                 DVG   
Sbjct: 133 VIRLLSTIGLGLPAFWLAIMMILLFSLSLGWFPVSGYG---------------SDVGERI 177

Query: 191 YHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAARNALLP 250
           +H  LP    ++        N+R +++  L  DY+T A+ +G +ENR+ + +   N+L+P
Sbjct: 178 HHLFLPCLTVALALSAVLTRNLRASLLMELQNDYVTAARARGQNENRIFWRHVMPNSLVP 237

Query: 251 SVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFMLFFNL 310
           +V  L++++G  IG  ++IE +F  PG+G +L  AI +RDY V+QG +L+  L  +  NL
Sbjct: 238 TVNLLAVNIGWLIGSTVVIESVFAIPGMGQLLVKAIISRDYMVVQGVVLVFALATVIVNL 297

Query: 311 LADMLYVVLDPRLR 324
           +AD+L V LDPR++
Sbjct: 298 IADLLTVALDPRVK 311