Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  174 bits (441), Expect = 3e-48
 Identities = 105/324 (32%), Positives = 173/324 (53%), Gaps = 13/324 (4%)

Query: 1   MGYFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFV 60
           +GY +RRL      + V A   F++ R  PGDP  ++   A    TPE++  ++  LG  
Sbjct: 2   LGYLIRRLLAAIPVMGVVALFVFLLLRLTPGDPAAII---AGDSATPEQLMRIRTSLGLN 58

Query: 61  EGPWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVL 120
           E P YVQ+ T+I  +L  +LG S+    + V +++G     ++ +A + +++S  +   L
Sbjct: 59  E-PLYVQFFTWIGRLLHGDLGVSL-ISQVPVLQMIGQRIEPTITVALSTIVLSVIVAVPL 116

Query: 121 GIFAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDW 180
           G+ AAWK G+  D F+    ++  +VP  VI  + +  FAI L W P       G  P  
Sbjct: 117 GVVAAWKHGTWVDRFVMGLSVIGFSVPVFVIGYVLIQIFAIELRWLPV-----QGFRPMA 171

Query: 181 TSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVF 240
             +    +     VLP    S + I       R  M+++L EDY+  A+ KG++E+RV+ 
Sbjct: 172 RGFGPFAE---RLVLPTLTLSFIYIALIARMTRAAMLDVLGEDYVRTARAKGINESRVLL 228

Query: 241 NYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLI 300
            +A RNA +P +T +     + I G ++ E +FN PG+G +  +A+ ARDY V+QG +L+
Sbjct: 229 RHALRNAAVPVITVIGTGFALLISGVVVTESVFNLPGIGRLTVDAVLARDYPVIQGMILL 288

Query: 301 MTLFMLFFNLLADMLYVVLDPRLR 324
            +   +  NLL D+ Y +LDPR+R
Sbjct: 289 TSGIYVAVNLLIDLAYTLLDPRIR 312