Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  147 bits (371), Expect = 4e-40
 Identities = 95/322 (29%), Positives = 162/322 (50%), Gaps = 5/322 (1%)

Query: 7   RLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWYV 66
           +L+   A LL    +NF +    PGDPV ++ A      +PE I A++   G ++     
Sbjct: 10  KLANAVALLLAVLVMNFCLIHLAPGDPVQVI-AGEMGGASPEVIAALRAKYG-LDHSLLE 67

Query: 67  QYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAAW 126
           Q  TY+  +   + G S  ++   V  L+      +L+LA  +++++  IG+VLG+ +A 
Sbjct: 68  QMFTYLGKVAHGDFGYSY-YFNQPVLGLILQRLPATLYLAAASLVVAVLIGTVLGVISAR 126

Query: 127 KRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTSWAFI 186
           +        +T   L   A P     +L +  F       P     T    P  T +A+ 
Sbjct: 127 RPNGLLSHGVTVLALAGHAAPIFWTGLLLLLLFGSVWPILPVN-GMTDVVNPK-TGFAYA 184

Query: 187 KDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAARN 246
            DV  H VLP     +V +  +    R NMI++L+ DYI  A+ KGL E  V+  +A RN
Sbjct: 185 ADVAKHLVLPSITLGLVFVAQYSRLARVNMIDVLSADYIRTARAKGLPERVVLVKHALRN 244

Query: 247 ALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFML 306
            L+P VT + +  G    G +++E ++++PG+G ++F++I  RDY  L G L    + ++
Sbjct: 245 TLIPIVTVVGLQFGNLFAGAVLVETVYSWPGMGRLVFDSILRRDYPTLMGVLFFSAVMVI 304

Query: 307 FFNLLADMLYVVLDPRLRKGGK 328
             N+L D++Y ++DPR+R G +
Sbjct: 305 AANILTDLVYRLIDPRIRAGAR 326