Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., binding-protein-dependent transport system inner membrane protein from Klebsiella michiganensis M5al

 Score =  145 bits (367), Expect = 1e-39
 Identities = 91/310 (29%), Positives = 164/310 (52%), Gaps = 16/310 (5%)

Query: 15  LLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWYVQYLTYIKS 74
           LL  + + F++ RA+PGDP  ++      + TP  +  ++   G  E P +VQY  ++++
Sbjct: 18  LLGISLITFMMVRAIPGDPARILLG---VRSTPAALARIRAQFGLDE-PLWVQYGYFLRN 73

Query: 75  ILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAAWKRGSRYDT 134
           +L  ELG SI  Y +   +L+      +L+L   +V+++ ++   L   AA +RG   D 
Sbjct: 74  LLQGELGKSI-VYRVDTLKLIASRLEPTLWLVLGSVLLAIALTVPLAAMAARQRGRLADR 132

Query: 135 FITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTSWAFIKDVGYHAV 194
            I          P   + ++ +  F+I L WFP      +G   D+       D  +H V
Sbjct: 133 LIRLFTTAGLGFPAFWLGIMLILLFSIVLGWFPV-----SGYGSDFV------DQLHHMV 181

Query: 195 LPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAARNALLPSVTA 254
           LP    ++      + N+R +++  +  DY+  A+ +G  E R+ + +   N+L+P++  
Sbjct: 182 LPCLTVALALSAVLIRNLRASLLMEMNSDYVVAARARGQQERRIFWRHVLPNSLVPTINL 241

Query: 255 LSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFMLFFNLLADM 314
           L++++G  IG  ++IE +F  PGLG +L  AI +RDY V+QG +++  L  +  +LLAD+
Sbjct: 242 LAVNIGWFIGSTVVIESVFAIPGLGQLLVKAIFSRDYMVVQGVVMVFALATVAVSLLADI 301

Query: 315 LYVVLDPRLR 324
           L V LDPR++
Sbjct: 302 LTVALDPRIK 311