Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., peptide ABC transporter permease from Klebsiella michiganensis M5al

 Score =  173 bits (438), Expect = 6e-48
 Identities = 101/322 (31%), Positives = 166/322 (51%), Gaps = 9/322 (2%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + LRRL      LL+A+ + F++    PGD     F      +T  R   +K + G ++ 
Sbjct: 4   FILRRLLQTLPMLLLASFIIFMLFAKTPGD-----FIDGNITLTAARAAELKAIYG-LDQ 57

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P   +YL ++  +L  +LG S++ Y + V++LL      S  LA  A++  + IG  +G+
Sbjct: 58  PLLTRYLHWLGQLLRGDLGFSLQ-YQIPVSQLLNQYIWNSFLLASVALVFYWGIGLTVGV 116

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTS 182
            +A K  S +D  ++  +    + P   + +L +  FA+ L W P G     G+  D + 
Sbjct: 117 ISALKPNSAFDHLVSVAVFAAMSFPTFFLCLLLIKWFAVDLHWLPVGGMTNTGS--DDSG 174

Query: 183 WAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNY 242
           W ++  V  H  LP+    ++Q G      R +M+ ++  D+I  A+ KGL E  V+  +
Sbjct: 175 WEYVLQVAAHLALPVLALVMLQAGSLTRYFRASMLEVVKMDFIRTARAKGLRERTVILKH 234

Query: 243 AARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMT 302
           A RNALLP +T L   L     G +I E +FN+PG G +  +++ ARDY VL G  L + 
Sbjct: 235 ALRNALLPIITLLGFELPGLFSGAIITEKVFNWPGAGHIHIDSLAARDYPVLMGFTLFLA 294

Query: 303 LFMLFFNLLADMLYVVLDPRLR 324
           +  +  NL+AD+LY   DPR+R
Sbjct: 295 VLTILGNLIADVLYAWADPRIR 316