Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Dipeptide transport system permease protein DppB from Enterobacter sp. TBS_079

 Score =  156 bits (395), Expect = 6e-43
 Identities = 108/338 (31%), Positives = 170/338 (50%), Gaps = 21/338 (6%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + LRRL       +    L F     +PGDPV +M       ++PER   +   LG +  
Sbjct: 4   FILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERG--ISPERHAQLLAELG-LNK 60

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P + QYL YI  +L  +LG S+K   L V +     F  +L L   A+I + ++G  +G+
Sbjct: 61  PLWQQYLNYIWGVLHGDLGISLKSR-LPVWDEFVPRFKATLELGVCAMIFATAVGIPVGV 119

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTG-----YAYTAGTT 177
            AA KRGS +D       L   ++P     M+ +   ++ L+  P         +   T 
Sbjct: 120 LAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVSDMVFLDDTN 179

Query: 178 P-------DWTSWA----FIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYIT 226
           P       D   W     FI  V  H +LP      + +   +   R++M+ +L EDYI 
Sbjct: 180 PLTGFMLIDTAIWGEEGNFIDAVA-HMILPAMVLGTIPLAVIVRMTRSSMLEVLGEDYIR 238

Query: 227 MAKGKGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAI 286
            A+ KGL+  RV+  +A RNA+LP VT + + +G  + G ++ E IF++PGLG  L +A+
Sbjct: 239 TARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDAL 298

Query: 287 TARDYQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
             RDY V+QG +L++   ++  NLL D+LY V++PR+R
Sbjct: 299 QRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336