Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., peptide ABC transporter from Cupriavidus basilensis FW507-4G11

 Score =  147 bits (372), Expect = 3e-40
 Identities = 98/325 (30%), Positives = 165/325 (50%), Gaps = 16/325 (4%)

Query: 1   MGYFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFV 60
           MGY LRRL+     + V A + F++    PGDP  ++   A    T + I  ++  LG +
Sbjct: 1   MGYLLRRLAATLPVMAVVAIVVFLLIHLSPGDPAALI---AGDLATVDDITRLRGALG-L 56

Query: 61  EGPWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVL 120
           + P + Q++ ++  + T +LGTSI F  + V  LL      +  +A   ++++  +   L
Sbjct: 57  DLPLWRQFVLWLGRLATGDLGTSI-FTQVPVARLLAQRLEPTACIAALTMLLTLLVAVPL 115

Query: 121 GIFAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPT-GYAYTAGTTPD 179
           G  AA++ GS  D  +    ++  ++P  ++  L ++ FAI L WFP  GYA  A    +
Sbjct: 116 GTLAAYRAGSWIDRLVMLFAVLAFSLPVFLVGYLLVYAFAIQLPWFPVQGYARLADGIGE 175

Query: 180 WTSWAFIKDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVV 239
           W             VLP    ++V I       R  ++ +L EDYI  A+ KGL    V+
Sbjct: 176 WLR---------SLVLPCVNLALVYIALVTRMTRATVLEVLHEDYIRTARAKGLGVLPVL 226

Query: 240 FNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLL 299
             +A RNA +P  T + M + + IGG ++ E +F  PG+G ++ +++   DY V+Q  LL
Sbjct: 227 -GHALRNAAIPIATTIGMGIALLIGGVVVTETVFAIPGVGRLVVDSVQRHDYPVIQSVLL 285

Query: 300 IMTLFMLFFNLLADMLYVVLDPRLR 324
           I     +  NL+ D+ Y + DPR++
Sbjct: 286 ISAGVYVLINLMIDLSYRLFDPRIK 310