Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., peptide/nickel transport system permease protein from Paraburkholderia graminis OAS925

 Score =  141 bits (356), Expect = 2e-38
 Identities = 94/311 (30%), Positives = 162/311 (52%), Gaps = 13/311 (4%)

Query: 15  LLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEGPWYVQYLTYIKS 74
           L++ + L F + + +PGDPVT M   A     P+ I +++ +   ++ P   QY  +++ 
Sbjct: 16  LILVSMLIFGLQKLLPGDPVTAM---AGEDQDPQLIASLR-VKYHLDEPVPTQYALWVRD 71

Query: 75  ILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGIFAAWKRGSRYDT 134
           ++  +LG S++   + V  L+      +L LA  A+I +  IG   G+ +A  RG   D 
Sbjct: 72  VVRGDLGASLRT-DVPVTSLIAQKLPVTLQLAAMAMIFAIGIGIPAGVISAASRGGALDY 130

Query: 135 FITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFPTGYAYTAGTTPDWTSWAFIKDVGYHAV 194
                 L   ++P   + ++ +F  ++     P+   Y + T   W S   IK +    +
Sbjct: 131 GANVFALSGMSIPNFWLGIMLIFIVSVRWHLLPSS-GYVSPTEDFWLS---IKTM----L 182

Query: 195 LPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKGKGLSENRVVFNYAARNALLPSVTA 254
           +P F          + + R+ M+++L  DYI  A+ KGL    VV  +A RNAL+P VT 
Sbjct: 183 MPAFVLGASLGAQLMRHTRSAMLSVLRTDYIRTARAKGLLRGTVVVKHAFRNALVPIVTV 242

Query: 255 LSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARDYQVLQGQLLIMTLFMLFFNLLADM 314
           L++  G  + G ++ E +F  PG G ++ +A+  RDY V+QG +L+  L  +  NL AD+
Sbjct: 243 LALLFGELLAGAVLTEQVFTIPGFGKLIVDAVFNRDYAVVQGVVLVTALCFIVVNLCADV 302

Query: 315 LYVVLDPRLRK 325
           LYV+L+PRLR+
Sbjct: 303 LYVLLNPRLRR 313