Pairwise Alignments

Query, 328 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., dipeptide transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  157 bits (396), Expect = 5e-43
 Identities = 103/334 (30%), Positives = 167/334 (50%), Gaps = 16/334 (4%)

Query: 3   YFLRRLSFYFAALLVAATLNFIIPRAMPGDPVTMMFAHATAQVTPERIEAMKQLLGFVEG 62
           + LRR+       +    L F +   +PGDP+ +M       V P    A    LG  E 
Sbjct: 4   FVLRRIGMVIPTFIGITILAFALIHLIPGDPIEVMMGERG--VDPAMHAAAMHRLGLDE- 60

Query: 63  PWYVQYLTYIKSILTWELGTSIKFYPLSVNELLGGAFGWSLFLAGTAVIISFSIGSVLGI 122
           P  +QY+ YI   L  +LGTSI      + E L   F  ++ L+  A++ +  +G   G+
Sbjct: 61  PLPMQYVHYIGRALHGDLGTSIITNTSVMGEFLA-RFPATVELSICAMLFALIVGLPAGV 119

Query: 123 FAAWKRGSRYDTFITPGMLVIQAVPQVVIAMLAMFTFAIGLSWFP-TGYAYTAGTTPDWT 181
           FAA +RG+  D  +    L   ++P     ++ +  F++ L W P +G        P  T
Sbjct: 120 FAALRRGTAVDHGVMGTALTGYSMPIFWWGLILIMVFSVKLGWTPVSGRIAVEYDIPHVT 179

Query: 182 SWAFI-----------KDVGYHAVLPLFCASIVQIGGFLVNMRNNMINLLAEDYITMAKG 230
            +  +           K    H +LP      + +       R++M+ +L EDYI  A+ 
Sbjct: 180 GFMLVDAMMSTDEGAFKSALSHLILPAIVLGTIPLAVVARMTRSSMLEVLREDYIRTARA 239

Query: 231 KGLSENRVVFNYAARNALLPSVTALSMSLGMAIGGQLIIEIIFNYPGLGTVLFNAITARD 290
           KGLS  RV+  +A RNAL+P VT + + +G  + G ++ E +F++PG+G  L +AI  RD
Sbjct: 240 KGLSPGRVIVVHALRNALIPVVTVIGLQVGTLLAGAVLTETLFSWPGIGKWLIDAIGRRD 299

Query: 291 YQVLQGQLLIMTLFMLFFNLLADMLYVVLDPRLR 324
           Y V+QG +L++   ++F NL+ D+LY VL+PR+R
Sbjct: 300 YPVVQGGILMIATLVIFVNLVVDLLYGVLNPRIR 333