Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (362), Expect = 4e-39
 Identities = 93/294 (31%), Positives = 156/294 (53%), Gaps = 28/294 (9%)

Query: 16  IGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAENLATDRRT 75
           IG  +L + F  A+ AP L  ++P         Y   V+   K  P  W+A         
Sbjct: 34  IGAVLLLIIFAGALFAPWLAPYDP---------YAQDVMLRMK--PPVWMANGTW----- 77

Query: 76  LAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKI 135
                  +++LGT ++GRD  S++ YGAR+SL +G  A +   F+ TV+G+ AGY+GGK+
Sbjct: 78  -------EYVLGTDKLGRDYLSRLLYGARISLFIGIAAALISGFIGTVMGLLAGYYGGKV 130

Query: 136 DDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQTMALRE 195
           D F++  +   L +P   +    A+ +G +  + I L +GC  W   A VVR+    +R+
Sbjct: 131 DAFISYLITTRLAMPVVMVALASASLMGGSLKVVIVL-LGCLLWDRFAVVVRASVQQIRD 189

Query: 196 KEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNTI 254
            E+V +A+ LG S+ RI+  EILPNL+  +       + +AI++E+ +SFLG+G  P T 
Sbjct: 190 AEYVASAQALGCSTLRILVSEILPNLVGALIVVATLEMAHAILLESALSFLGVGVQPPTP 249

Query: 255 SWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQLRS 308
           SWG+M   +      +  + W +  P ++L +LV G+ L+   + ++  P  R+
Sbjct: 250 SWGLM---IAEGKPYMFFSPWVIAIPGVALMILVLGINLVGDGLRDLILPDGRN 300