Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  120 bits (301), Expect = 4e-32
 Identities = 91/296 (30%), Positives = 139/296 (46%), Gaps = 37/296 (12%)

Query: 8   LRGNRMAMI-GVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIA 66
           LR  R+AM+ G ++LG + +LA+ AP L  ++P                         I 
Sbjct: 20  LRNGRLAMLLGGSLLGGWLILALFAPWLAPYDP-------------------------IY 54

Query: 67  ENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGV 126
           +N  T+ R LA      H  GT   GRD+ S+V + ARV L +     I    + T +G 
Sbjct: 55  QN--TELRMLA--PHLAHPFGTDNFGRDILSRVIWAARVDLQICVIGVIFPFMIGTFVGA 110

Query: 127 SAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEA-GPLTIALIIGCTSWAWGARV 185
            +GY GG+ D+     ++I+L  P   L+  + A +G   G   IA+ +    W   AR+
Sbjct: 111 LSGYIGGRFDNLCMRVIDIVLAFPFLVLMLAIIAILGPGLGSFYIAMAL--VGWVSYARL 168

Query: 186 VRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISF 245
           +RSQ + L+E +F  AA+ LG    RI+F  +LPN +       +   +  ++  A++S+
Sbjct: 169 IRSQILVLKESDFALAAKSLGFGHLRILFRHLLPNAMFGSIVFSMSDAVLVLLSGASVSY 228

Query: 246 LGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDE 300
           LGLG  P    WG M   V    + L  AWW    P L++  L  G +LL   V E
Sbjct: 229 LGLGVQPPMAEWGTM---VAEGQAFLTSAWWICTFPGLAIVTLAMGFSLLADGVAE 281