Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems permease components-like from Synechococcus elongatus PCC 7942

 Score =  121 bits (303), Expect = 3e-32
 Identities = 79/231 (34%), Positives = 131/231 (56%), Gaps = 13/231 (5%)

Query: 84  HILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKIDDFLTAAM 143
           H+LGT   GRD +S++ YG+R+SL+VG    I    L  ++G  AGY+GG +D  +   +
Sbjct: 124 HLLGTDDQGRDQFSRLLYGSRISLSVGLVGVILTFPLGILVGGIAGYWGGWVDALIMRLV 183

Query: 144 NIMLVIPQYPLLFVLAAFI--GEAGPLTIALIIGCTS---WAWGARVVRSQTMALREKEF 198
            +++ IP   LL  LAA +  G +      LI+  TS   WA  ARV+R Q ++LRE+E+
Sbjct: 184 EVLMTIPSLYLLVALAAVLPPGLSSAERFLLIVAITSLINWAGLARVIRGQVLSLREREY 243

Query: 199 VKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG----DPNTI 254
           V+A++V+G S   ++   ILP  ++ V  +   +V   I+ E+ +S +GLG    DP   
Sbjct: 244 VQASQVMGASRLYLLIRHILPQTLTYVIIAATLAVPSFIVAESVLSLVGLGIQQPDP--- 300

Query: 255 SWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQ 305
           SWG ML ++ T++SML+   W +  P L + + V    ++   + +  +P+
Sbjct: 301 SWGNML-SLATNASMLLLNPWLIWPPALLIVVAVLAFNVVGDGLRDRLDPR 350