Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., peptide transport system permease ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  127 bits (318), Expect = 5e-34
 Identities = 84/302 (27%), Positives = 149/302 (49%), Gaps = 29/302 (9%)

Query: 4   LWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDG 63
           +W  L    +A+IG+ ++ +    A  AP +  ++P ++      +    ++ A   P+ 
Sbjct: 19  VWTRLLHRPLALIGLAVIIVVVGAAALAPWVVPYDPHEQF-----FEGLTIEGAPLPPN- 72

Query: 64  WIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATV 123
                             +   LGT  +GRD+ S++ YGAR SL +G  A      + ++
Sbjct: 73  ------------------SQFWLGTDLVGRDLLSRLIYGARTSLVIGVVANGIAVVIGSL 114

Query: 124 IGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGA 183
           +G++AGYF G +D  L    ++M+  P   L  VLAA I       +A++I   +W   A
Sbjct: 115 VGIAAGYFRGWVDTVLMRFTDLMMAFPALLLAIVLAA-IFTPSLWIVAMVIAMVNWVQIA 173

Query: 184 RVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATI 243
           RVV ++T ++ E++FV A   +G  + RI+F  ILP+L+S +       +   +++EAT+
Sbjct: 174 RVVYTETRSIAERDFVTAERAMGAGAGRILFRHILPHLLSTIIVWATLGIATTVLLEATL 233

Query: 244 SFLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIA 302
           SFLG+G  P   SWG +++  QT       A W +  P  ++  L     L+  A+ ++ 
Sbjct: 234 SFLGIGVQPPIPSWGNIIFENQT---YFTSAPWLVFIPGAAILALALAFNLVGDALRDVL 290

Query: 303 NP 304
           +P
Sbjct: 291 DP 292