Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., peptide transport system permease from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 1e-32
 Identities = 87/315 (27%), Positives = 152/315 (48%), Gaps = 34/315 (10%)

Query: 4   LWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDG 63
           +W     ++ AM    +L +  L A+ APL+          NP++  A  +  A+  P  
Sbjct: 25  VWWSFTHSKTAMFSAALLAILILTALFAPLIAPQ-------NPYDGAALDMWKAELPP-- 75

Query: 64  WIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATV 123
                            +  ++LGT   GRD+ S + YG R+S+ +G  +      +   
Sbjct: 76  -----------VWEEGGEWPYLLGTDTQGRDMLSAILYGTRISIVIGIASVALSLLIGMS 124

Query: 124 IGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLT---------IALII 174
            G+ AGYFGG ID+ L    ++ L IP   +  +++  + +  P++         + L I
Sbjct: 125 AGLIAGYFGGFIDNLLMRFGDVTLSIPTILVAILVSTVVRQMLPVSLREVGASAVLILAI 184

Query: 175 GCTSWAWGARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVM 234
             ++W   AR VR+Q +    K++V AA ++G  + RI+   ILPN ++ +  +   +  
Sbjct: 185 SLSAWVQYARTVRAQAIVETGKDYVSAARLIGVPARRIMANHILPNTLTPIMVAATLNFG 244

Query: 235 YAIMMEATISFLGLG-DPNTISWGIMLYNVQTSSSMLI-GAWWELLAPCLSLTLLVTGLA 292
            AI+ EAT+SFLG+G  P+  S G +   ++  +  L  G+WW +L P + L LLV  + 
Sbjct: 245 MAILTEATLSFLGIGMPPSQPSLGTL---IRIGNQFLFSGSWWIVLFPVIQLCLLVVAVN 301

Query: 293 LLNFAVDEIANPQLR 307
           +L   + +  NP+LR
Sbjct: 302 MLGDWLRDALNPKLR 316