Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  154 bits (388), Expect = 4e-42
 Identities = 101/304 (33%), Positives = 146/304 (48%), Gaps = 40/304 (13%)

Query: 6   KLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPH----EYPAFVVKAAKANP 61
           K+   N  A+ G   L L   +A+ AP+L   +P    G P     ++PAF         
Sbjct: 60  KVFLANPNALFGTAFLALVIAVALLAPVLYPGDPLSMVGKPFLWPGQHPAFP-------- 111

Query: 62  DGWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLA 121
                                   LGT  +GRDV + + +G+R+SL VG  A        
Sbjct: 112 ------------------------LGTDSLGRDVLAGILHGSRISLFVGLMATALGLTFG 147

Query: 122 TVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAW 181
            V+G  AGYF G IDD L   + I   +P + LL VL A + +    T+ L I   SW  
Sbjct: 148 VVVGAIAGYFSGWIDDLLVRLIEIFQTLPSFVLLVVLVAIV-QPSATTVTLAIAVISWPT 206

Query: 182 GARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEA 241
            AR+ R++  A+REK+FV AA  LG    RII  EILPN +  +  +    V  AI+ME+
Sbjct: 207 VARLTRAEFRAIREKDFVMAARSLGFGHGRIIVREILPNALPPIIVTSSVMVATAILMES 266

Query: 242 TISFLGLGDPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEI 301
            +SF+GLGDPN +SWG M   + T   ++  AW+    P L++   V  L L+   +++ 
Sbjct: 267 ALSFMGLGDPNVVSWGSM---IGTGRELVRTAWYLTALPGLAIVFTVLALNLIGDGLNDA 323

Query: 302 ANPQ 305
            NP+
Sbjct: 324 LNPR 327