Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 363 a.a., mureinpeptideoligopeptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  130 bits (328), Expect = 4e-35
 Identities = 89/227 (39%), Positives = 128/227 (56%), Gaps = 10/227 (4%)

Query: 85  ILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCF-LATVIGVSAGYFGGKIDDFLTAAM 143
           +LGT R+GRDV S++ YGAR+SL +G   GITV F L  VIG  AGY GG  D  +   +
Sbjct: 138 LLGTDRLGRDVLSRIIYGARISLTIGL-LGITVSFVLGIVIGGLAGYHGGIFDLVVQRLI 196

Query: 144 NIMLVIPQYPLLFVLAAFIGEA-GPLTIAL----IIGCTSWAWGARVVRSQTMALREKEF 198
            ++  IP  PL   LAA +     PL I L    I+G   W   AR VRS+ +ALRE+++
Sbjct: 197 EVLQSIPSIPLWLSLAAIMPATWSPLLIYLGITVILGLLDWTGLARAVRSKLLALREEDY 256

Query: 199 VKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNTISWG 257
           V AA+++G  S RII   ++P  +S + A+   S+   I+ E  +SFLGLG  P   SWG
Sbjct: 257 VLAAQLMGARSGRIIGRHLVPGFMSHLIATATISIPGMILGETALSFLGLGLRPPITSWG 316

Query: 258 IMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANP 304
           I+L   ++ S +    W  LL P + + L++     L   + + A+P
Sbjct: 317 ILLTEAKSVSVIAFYPW--LLFPTIPVILVILAFNFLGDGLRDAADP 361