Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., oligopeptide uptake ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  120 bits (300), Expect = 7e-32
 Identities = 77/214 (35%), Positives = 115/214 (53%), Gaps = 8/214 (3%)

Query: 87  GTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKIDDFLTAAMNIM 146
           GT   GRD+  +V  G ++S+AVG  A +    +  V G ++GY GG++D+ +   + I+
Sbjct: 159 GTDSNGRDLLVRVMLGGQISIAVGLLASLVSLGIGVVYGATSGYIGGRVDNVMMRLVEIL 218

Query: 147 LVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQTMALREKEFVKAAEVLG 206
             +P   L+ VL  F G +  L I L+IG   W   AR+VR QT+AL+ +EFV AA+ LG
Sbjct: 219 YSLPFVFLVVVLVVFFGRSFIL-IFLVIGAVEWLDMARIVRGQTLALKRREFVGAAQALG 277

Query: 207 ESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNTISWGIMLYNVQT 265
            + W+II   I+PN I  V       V   I++E+ +SFLGLG      SWG +   +  
Sbjct: 278 LTDWQIIRRHIIPNTIGPVIVFVTVVVPKVILLESFLSFLGLGVQAPLTSWGAL---ISE 334

Query: 266 SSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVD 299
            ++ +  A W L+ P +     V  L  LNF  D
Sbjct: 335 GANNIQSAPWLLIFPAI---FFVVTLFSLNFVGD 365