Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 600 a.a., dipeptide ABC transporter permease and ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  129 bits (325), Expect = 1e-34
 Identities = 89/305 (29%), Positives = 143/305 (46%), Gaps = 33/305 (10%)

Query: 5   WKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGW 64
           W LL  NR+A  G+ +LGL  LL V  P+L   +PD         P              
Sbjct: 20  WHLLLNNRLATGGLVLLGLILLLIVLVPILPLPDPDATAPVNRLQPVLT----------- 68

Query: 65  IAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVI 124
                            A H+LGT ++GRD+ S++ +G RVS+AVGF A +    + + I
Sbjct: 69  -----------------AGHLLGTDQLGRDILSRLLWGTRVSIAVGFAATLIAAGIGSAI 111

Query: 125 GVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGAR 184
           G+ AGY GG+ D+ +   +++++  P   L   + A +G  G +     I   +  + AR
Sbjct: 112 GIIAGYAGGRTDNAMMRGIDMLMAFPYILLALAIVAALG-PGLMNALYAIALVNIPFFAR 170

Query: 185 VVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATIS 244
            VR  T+     EFV AA + G+    +I  E+LPN++ ++  +   +  + I+  A +S
Sbjct: 171 NVRGVTLGYAHSEFVDAARLSGKGHLSVILTEVLPNVMPVIVITMSTTAGWMILETAGLS 230

Query: 245 FLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIAN 303
           FLGLG  P     G ML       + L  A    + P   + L+V  L +L   + ++ +
Sbjct: 231 FLGLGAQPPQADLGSML---GEGRAQLFTAPHVSVVPGAMIFLIVISLNVLGDGIRDVLD 287

Query: 304 PQLRS 308
           P+LRS
Sbjct: 288 PRLRS 292