Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 279 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  153 bits (386), Expect = 6e-42
 Identities = 97/293 (33%), Positives = 156/293 (53%), Gaps = 35/293 (11%)

Query: 15  MIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGWIAENLATDRR 74
           +IG+ IL    +LA+ AP L   +P +    P + PA              +E L     
Sbjct: 14  VIGLIILIAVVILAICAPTLFPDDPWEMVAAPFQPPA--------------SEGLP---- 55

Query: 75  TLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGK 134
                      LG+  +GR+V + +AYGARVSL +G  + +    +   IG  AGYFGG+
Sbjct: 56  -----------LGSDMLGRNVAAGIAYGARVSLTIGVASTLAALCIGVTIGAIAGYFGGR 104

Query: 135 IDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALI-IGCTSWAWGARVVRSQTMAL 193
           +DDF+     +   IP + L  +L A IG    LT  +I IG  SW   AR+ R++ M L
Sbjct: 105 VDDFMMRLTELFQTIPGFILAILLVATIGPT--LTNVIISIGAVSWPPLARLTRAEFMRL 162

Query: 194 REKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLGDPNT 253
           R +EFV+AA   G++   +    ILPN IS +  +   ++  AI++E+ +SF+GLGDPN 
Sbjct: 163 RGREFVQAAVCQGQAPLIVALRHILPNAISPIIVTGSLTIATAILIESALSFMGLGDPNL 222

Query: 254 ISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQL 306
           +SWG+M   +  S +++  AWW  + P +++ L V  + L+   ++++ NP++
Sbjct: 223 MSWGLM---IGASRTVIRQAWWMSVFPGIAILLTVLAINLVGEGLNDMLNPRI 272