Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  124 bits (310), Expect = 4e-33
 Identities = 77/241 (31%), Positives = 125/241 (51%), Gaps = 4/241 (1%)

Query: 69  LATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSA 128
           LA+D      +  A H  GT ++GRD++S+V    R+ L +   + + V  +  + G++A
Sbjct: 65  LASDTAQALKAPSAAHWFGTDQLGRDIFSRVVVATRLDLFIAVASVVLVFLMGGLAGIAA 124

Query: 129 GYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRS 188
           GYFGG  D  +    + ++  P + L   + A +G      I +     ++   ARV R+
Sbjct: 125 GYFGGWTDRIVGRIADTIMAFPLFVLAMGIVAALGNT-VQNIIIATAIVNFPLYARVARA 183

Query: 189 QTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGL 248
           +    RE  FV AA + G S   I+ + ILPN++ I+      ++ YAI+  A +SF+GL
Sbjct: 184 EANVRREAGFVMAARLSGNSEMSILLVHILPNIMPIMIVQMSLTMGYAILNAAGLSFIGL 243

Query: 249 G-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQLR 307
           G  P T  WGIM+   + +S M+ G WW  L P L+L + V    LL   + +I +PQ R
Sbjct: 244 GVRPPTAEWGIMV--AEGASFMVSGEWWIALFPGLALMIAVFCFNLLGDGLRDIFDPQRR 301

Query: 308 S 308
           +
Sbjct: 302 T 302