Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  124 bits (311), Expect = 5e-33
 Identities = 72/240 (30%), Positives = 122/240 (50%), Gaps = 18/240 (7%)

Query: 84  HILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKIDDFL---- 139
           H+LGT ++G+D+   V    R SL +G    +    +  ++G+SAGYF G +DD +    
Sbjct: 241 HVLGTDKVGQDILYLVLKSIRTSLVIGLVTTLVTLPIGVLLGISAGYFRGWVDDLIQYLY 300

Query: 140 -------------TAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVV 186
                         A + + +VI  +P  F  AA   +   L +  I+G TSW   AR++
Sbjct: 301 STLNSIPSVLLIAAAVLMMQVVIDTHPEWFATAAERADLRLLALCFILGMTSWTGLARLL 360

Query: 187 RSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFL 246
           R + + L + E+++AA+  G SSWRI+   ILPN++ IV  + +      +M EA +S+L
Sbjct: 361 RGEALKLSQLEYIQAAQSFGVSSWRILLRHILPNVMHIVLIALVMDFSSLVMTEAVLSYL 420

Query: 247 GLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIANPQ 305
            +G DP  +S+G ++ N +   +     WW L A  + + +LV    L    V +  +P+
Sbjct: 421 EIGVDPTMVSFGSLINNARMELAREPMVWWSLAAAFVFMFILVLAANLFADVVRDAFDPR 480