Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 373 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  106 bits (265), Expect = 8e-28
 Identities = 74/224 (33%), Positives = 117/224 (52%), Gaps = 13/224 (5%)

Query: 86  LGTTRMGRDVWSQVAYGARVSL-AVGFGAGITVCFLATVI--GVSAGYFGGKIDDFLTAA 142
           LGT  +GR V +++ +G RVSL AVG    I  C +A  +  G  AGY GG++D  L  A
Sbjct: 89  LGTDHLGRSVLARLCHGTRVSLFAVG---AILTCIVAVGLTAGCVAGYAGGRVDSLLMRA 145

Query: 143 MNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQTMALREKEFVKAA 202
            ++ +  P + L   L   +G +G   + + + CT WAW AR  R   + L+++E+V AA
Sbjct: 146 CDVFMTFPTFILALFLVGVLG-SGLTNVIIAVACTHWAWYARFARGLVLGLKQREYVLAA 204

Query: 203 EVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLG-DPNTISWGIMLY 261
              G    R++   ILP +++ +       V + ++  + +SFLGLG  P T  WG+M+ 
Sbjct: 205 RAAGTRPARLVLRHILPPVLAQLLVMAGLDVGHMLLHVSGLSFLGLGVRPPTPEWGVMIG 264

Query: 262 NVQTSSSMLIGAWWE-LLAPCLSLTLLVTGLALLNFAVDEIANP 304
           + +      IGA  E LL P L + + V    LL  A+ +  +P
Sbjct: 265 DARE----YIGAHPEQLLYPGLMIFVTVMAFNLLGDALRDALDP 304