Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., oligopeptide ABC transporter permease OppC from Pantoea sp. MT58

 Score =  124 bits (312), Expect = 2e-33
 Identities = 98/306 (32%), Positives = 145/306 (47%), Gaps = 45/306 (14%)

Query: 2   KALWKLLRG----NRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAA 57
           ++LW+  R     NR A+I + +L +  L  + AP+L     D    +    P       
Sbjct: 23  RSLWQDARRRFIHNRAALISLLVLLVITLFVIFAPMLAHFTYDDTDWSMMSSP------- 75

Query: 58  KANPDGWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITV 117
              PD                   + H  GT   GRD+  +VA G R+SL VG  + +  
Sbjct: 76  ---PD-----------------TTSGHWFGTDSSGRDILVRVAIGGRISLMVGVASALIA 115

Query: 118 CFLATVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLF---VLAAFIGEAGPLTIALII 174
             + T+ G  AGY GGK D  +   M I+ ++  +P +F   +L  F G    L I   I
Sbjct: 116 VIVGTLYGSIAGYLGGKTDSVM---MRILEILNSFPFMFFVILLVTFFGR-NILLIFAAI 171

Query: 175 GCTSWAWGARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVM 234
           G  SW   AR+VR QT++L+ KEF++AA V G S+W+I+   I+PN++ +V       V 
Sbjct: 172 GMVSWLDMARIVRGQTLSLKRKEFIEAAHVGGVSTWKIVVRHIVPNVLGVVVVYASLLVP 231

Query: 235 YAIMMEATISFLGLGDPNTI-SWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLAL 293
             I+ E+ +SFLGLG    + SWG +L +   ++SM +  W  LL P      LV  L  
Sbjct: 232 SMILFESFLSFLGLGTQEPLSSWGALLSD--GANSMEVSPWL-LLYPA---GFLVVTLFC 285

Query: 294 LNFAVD 299
            NF  D
Sbjct: 286 FNFIGD 291