Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., peptide ABC transporter permease from Klebsiella michiganensis M5al

 Score =  120 bits (301), Expect = 5e-32
 Identities = 85/313 (27%), Positives = 151/313 (48%), Gaps = 43/313 (13%)

Query: 5   WKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGW 64
           W+ LR NR+AM+ + +L +  L  V  PL +  + D                        
Sbjct: 32  WRALRRNRLAMLCLLLLTVMALWCVLGPLWSPWQDD------------------------ 67

Query: 65  IAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVI 124
                ATD         A H LGT  +GRD+++++    R+SL +G    +    L  ++
Sbjct: 68  -----ATDALMNNKPPGAAHWLGTDFLGRDIYTRLLLAGRISLIIGLLTMLLSVALGYLL 122

Query: 125 GVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGE------AGPLTIALIIGCTS 178
           G  +GY GG  D  +    ++++ IP  PLL V  A + E      +    + +++    
Sbjct: 123 GALSGYAGGLTDKLIMRFADLVMTIPGLPLLIVAGAMLSELDFSPDSRIYMVVIMLSLLE 182

Query: 179 WAWGARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIM 238
           W   AR+VR Q ++LRE++F+ A ++LG S+ R +F  +LPN + I+      +V  AI+
Sbjct: 183 WPKLARLVRGQCLSLRERDFMLATQILGLSARRRLFGHLLPNTVPILVVMATMAVANAIL 242

Query: 239 MEATISFLGLG-DPNTISWGIMLYNVQTSSSMLIGAW---WELLAPCLSLTLLVTGLALL 294
            E+ +S+LGLG  P T SWG    N+  +++ LI      W  + P +++ + V  + +L
Sbjct: 243 SESALSYLGLGVVPPTPSWG----NMMDAANSLIDFQRRPWLWMPPGIAIFITVIAINVL 298

Query: 295 NFAVDEIANPQLR 307
              + +  +P+++
Sbjct: 299 GDGLRDAMDPKMK 311