Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Oligopeptide transport system permease protein OppC from Enterobacter sp. TBS_079

 Score =  121 bits (303), Expect = 3e-32
 Identities = 79/217 (36%), Positives = 116/217 (53%), Gaps = 8/217 (3%)

Query: 84  HILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYFGGKIDDFLTAAM 143
           H  GT   GRD+  +VA G R+SL VG  A +    + T+ G  +GY GGK+D  +   +
Sbjct: 82  HYFGTDSSGRDLLVRVAIGGRISLMVGIAAALVAVIVGTLYGSLSGYLGGKVDSVMMRML 141

Query: 144 NIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGARVVRSQTMALREKEFVKAAE 203
            I+   P    + +L  F G+   L I + IG  SW   AR+VR QT++L+ KEF++AA+
Sbjct: 142 EILNSFPFMFFVILLVTFFGQ-NILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQ 200

Query: 204 VLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATISFLGLGDPNTI-SWGIMLYN 262
           V G S+  I+   I+PN++ +V       V   I+ E+ +SFLGLG    + SWG +L +
Sbjct: 201 VGGVSTGNIVVRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSD 260

Query: 263 VQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVD 299
              ++SM +  W  LL P      LV  L   NF  D
Sbjct: 261 --GANSMEVSPWL-LLYPA---GFLVVTLFCFNFIGD 291