Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., putative D,D-dipeptide transport system permease protein DdpC from Enterobacter sp. TBS_079

 Score =  118 bits (296), Expect = 2e-31
 Identities = 87/308 (28%), Positives = 141/308 (45%), Gaps = 41/308 (13%)

Query: 2   KALWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANP 61
           K  W +LR + + +IG  I+ L  LL V +P +  H+P+                     
Sbjct: 22  KLFW-MLRKSPLTLIGAAIMILMLLLMVTSPWIVPHDPN--------------------- 59

Query: 62  DGWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLA 121
                   A D      +  A+H  GT  +GRD++S+V  G++ S++ G    +    + 
Sbjct: 60  --------ALDLTARLQAPSAEHWFGTDEVGRDLFSRVLAGSQQSISAGLAVVVIAGGIG 111

Query: 122 TVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAW 181
           +++G  +G  GG+ D  +   M++ML IP   L   LAA +G +      L I      +
Sbjct: 112 SLLGCLSGVMGGRGDAIIMRIMDVMLSIPSLVLTMALAAALGPS-LFNAMLAIAIVRIPF 170

Query: 182 GARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLIS--IVGASF-IGSVMYAIM 238
             R+ R QT+ +R+  +V+AA   G S W +I   IL N +   IV AS  IGS   AI+
Sbjct: 171 YVRLARGQTLVVRQFTYVQAARTFGASRWHLISWHILRNALPPLIVQASLDIGS---AIL 227

Query: 239 MEATISFLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFA 297
           M AT+ F+GLG    T  WG M   V    + ++  WW    P  ++ +   G  L    
Sbjct: 228 MAATLGFIGLGAQQPTAEWGAM---VAVGRNYVLDQWWYCAFPGAAILITAVGFNLFGDG 284

Query: 298 VDEIANPQ 305
           + ++ +P+
Sbjct: 285 IRDLLDPK 292