Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., oligopeptide/dipeptide ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  124 bits (311), Expect = 3e-33
 Identities = 95/305 (31%), Positives = 138/305 (45%), Gaps = 37/305 (12%)

Query: 16  IGVTILGLFFLLAVAA---PLLTSHEPDKRTGNPHEYPAFVVKAAKAN-PDGWIAENLAT 71
           + V    L F+LAV+A   PL+  H P         Y    +    A  P  W  E  A 
Sbjct: 22  VAVGSFALLFILAVSAILAPLIAPHSP---------YDGATLDIMNAELPPAWKPEGTA- 71

Query: 72  DRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVIGVSAGYF 131
                      D +LGT   GRD+ S + YG RVSL +G GA      +   +G+ +GY 
Sbjct: 72  -----------DFLLGTDNQGRDILSAMLYGMRVSLVIGLGAVALQSVIGIFVGLVSGYG 120

Query: 132 GGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIG---------EAGPLTIALIIGCTSWAWG 182
             +ID  L    ++ L    Y +     A +          E     +  +IG + W   
Sbjct: 121 SKRIDSILMRVADVQLSFSSYMVAIFFGAILQMVVGVGRYEEVAVPFLIFVIGLSEWPQI 180

Query: 183 ARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEAT 242
           AR VR+  +A ++KE+V+AA V+G  + RI+   ILPN ++ V       V  A+M EA 
Sbjct: 181 ARTVRASVLAEKKKEYVEAARVIGLPARRIMLRHILPNTLTPVLVISTVQVANAVMSEAA 240

Query: 243 ISFLGLGDPNT-ISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEI 301
           +SFLGLG P T  S G ++ +         G+WW  L P + L LLV  + LL   + + 
Sbjct: 241 LSFLGLGMPVTQPSLGSLIKS--GFQYFFSGSWWITLFPGIMLILLVLSINLLGDWLRDF 298

Query: 302 ANPQL 306
            NP+L
Sbjct: 299 LNPKL 303