Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., peptide/nickel transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  119 bits (299), Expect = 7e-32
 Identities = 94/307 (30%), Positives = 151/307 (49%), Gaps = 39/307 (12%)

Query: 2   KALWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANP 61
           + L + +R NR A+ G  ++ L  ++A+ AP LT ++P                      
Sbjct: 22  RGLTRFMR-NRAAVFGAFLVTLIVIMALFAPWLTHYDP---------------------- 58

Query: 62  DGWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVG-FGAGITVCFL 120
                  +     T+  +  A H  GT  +GRDV S++ YGAR SL  G    GI V  L
Sbjct: 59  -------VQASFMTVRQAPSAAHWFGTDELGRDVLSRLLYGARASLLAGVVSVGIAV-VL 110

Query: 121 ATVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIAL-IIGCTSW 179
              +G+ AGYFG  +D  ++   + +L IP   L   L+AF+G +  LT A+  IG ++ 
Sbjct: 111 GVPLGLIAGYFGRFVDGVISRIADALLSIPFLILAIALSAFLGPS--LTNAMAAIGISAM 168

Query: 180 AWGARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMM 239
               R+ R Q ++++ +E+V+ A  +G    RI+   ILPN++  +      +V  AI+ 
Sbjct: 169 PRFIRLTRGQAISVKAEEYVEGARAIGLDHARIMLRYILPNVLPPIIVQASLTVASAIIA 228

Query: 240 EATISFLGLGD-PNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAV 298
           EA++SFLGLG  P   SWG ML    T+   +  A W  + P +++ L V G  LL   +
Sbjct: 229 EASLSFLGLGQLPPAPSWGSML---NTAKDFVSQAPWMSIFPGIAIFLAVLGFNLLGDGL 285

Query: 299 DEIANPQ 305
            +  +P+
Sbjct: 286 RDALDPR 292