Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., ABC transporter permease from Bifidobacterium breve UCC2003

 Score =  110 bits (274), Expect = 7e-29
 Identities = 85/306 (27%), Positives = 136/306 (44%), Gaps = 34/306 (11%)

Query: 5   WKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGW 64
           W+ LR N + +I   ++    ++A+A  L T  +P+                        
Sbjct: 60  WRTLRRNPLFIISGLLILFIIVVAIAPGLFTKQDPN------------------------ 95

Query: 65  IAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVI 124
                A D         A H  G    G DV+++V YG R SL+VG  + + V  + T+I
Sbjct: 96  -----ACDLGNSLSPASAGHPFGYDLQGCDVYTRVIYGTRTSLSVGVLSTLLVVIVGTLI 150

Query: 125 GVSAGYFGGKIDDFLTAAMNIMLVIPQ-YPLLFVLAAFIGEAGPLTIALIIGCTSWAWGA 183
           G  AG+FGG +D  L+   +I   +P     + VL  F        I L++    W    
Sbjct: 151 GAVAGFFGGWVDAVLSRINDIFFALPMLLGAIVVLQMFKTSKSIWKIVLVLTLFGWVGVC 210

Query: 184 RVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATI 243
           R+ RS  +  +  EF  A+  LG +  R +F  ILPN ++ +      S+   I+ EAT+
Sbjct: 211 RIARSAVLESKNLEFNTASTALGSTPARNLFRHILPNSLAPIIVIATTSLASYIVAEATL 270

Query: 244 SFLGLGDP-NTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIA 302
           SFLG+G P  T+SWG  + + QT+   L      L  P  +L + V    ++  AV +  
Sbjct: 271 SFLGVGLPTTTVSWGGDISSAQTN---LQTDPMVLFYPSAALAITVLAFIMMGDAVKDAL 327

Query: 303 NPQLRS 308
           +P+ R+
Sbjct: 328 DPKSRT 333