Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., cytochrome C550 from Burkholderia phytofirmans PsJN

 Score =  124 bits (312), Expect = 2e-33
 Identities = 81/302 (26%), Positives = 143/302 (47%), Gaps = 33/302 (10%)

Query: 5   WKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPDGW 64
           W+   GN +++ G  IL L  ++A   PL+  H+P                         
Sbjct: 32  WRRFAGNPLSVFGFVILALLIIVAAIGPLIAPHDP------------------------- 66

Query: 65  IAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLATVI 124
             + + +DR  L       H  GT ++GRD+ S++ YG+R++L++     + V  +  +I
Sbjct: 67  -LQQVLSDR--LLPPGSPSHWFGTDQLGRDILSRLIYGSRLTLSIAILVVVIVVPVGLLI 123

Query: 125 GVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWGAR 184
           G +AG+FGG +D+ L    ++ L  P+  L    AA +G  G +   + I  T+W   AR
Sbjct: 124 GTTAGFFGGWVDNALMRITDVALAFPKIVLALAFAAALG-PGVMNAVIAISITAWPAYAR 182

Query: 185 VVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEATIS 244
           + R++T+ L + +F+  A + G S  RI+   I+P   S V       +   I+  A + 
Sbjct: 183 LARAETLRLVQADFIHVARLQGASRLRILLRYIVPLCSSSVIVRATLDMAGIILTVAGLG 242

Query: 245 FLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDEIAN 303
           FLGLG  P +  WG   Y V +  ++L+ +WW    P  ++ L+     LL   + ++ +
Sbjct: 243 FLGLGAQPPSPEWG---YMVASGRNVLLDSWWVATIPGFAILLVSLAFNLLGDGLRDVFD 299

Query: 304 PQ 305
           P+
Sbjct: 300 PR 301