Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., peptide ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  126 bits (317), Expect = 6e-34
 Identities = 94/299 (31%), Positives = 139/299 (46%), Gaps = 38/299 (12%)

Query: 3   ALWKLLRGNRMAMIGVTILGLFFLLAVAAPLLTSHEPDKRTGNPHEYPAFVVKAAKANPD 62
           A W+ +R NR A  G  +L L  +  VA P L  + P                       
Sbjct: 31  AAWRFVR-NRAAFAGFVVLMLIVIACVAGPWLLPNNPID--------------------S 69

Query: 63  GWIAENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLAT 122
            W A +L    + +       H  GT  +GRD+ ++   G RVSL VG    +    +  
Sbjct: 70  DWSAISLPPTLQNM-------HWFGTDELGRDLLARTLQGGRVSLEVGLLGTLVSGLIGV 122

Query: 123 VIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAWG 182
             G +AGY GG++D  +   +++M  IP   +  ++    G A  L + L I   SW   
Sbjct: 123 AYGATAGYLGGRVDAVMMRIVDMMYAIPYMLIAILMMTMFGRAFYLVV-LTISAFSWLDM 181

Query: 183 ARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEAT 242
           ARVVR QT++LR +EF+ AA  +G SS  II   I+PNL  +V      +V   ++ E+ 
Sbjct: 182 ARVVRGQTLSLRSREFIDAARAIGVSSGSIIARHIVPNLFGVVVVYASVTVPNIVLTESV 241

Query: 243 ISFLGLG--DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVD 299
           +SFLGLG  +P T SWG++   +Q  +  L    W LL P +   +L   L  +NF  D
Sbjct: 242 LSFLGLGVQEPMT-SWGVL---IQDGAQKLESMPWLLLCPAV---MLCVTLYCVNFVGD 293