Pairwise Alignments

Query, 341 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., peptide ABC transporter permease from Burkholderia phytofirmans PsJN

 Score =  116 bits (290), Expect = 8e-31
 Identities = 78/241 (32%), Positives = 126/241 (52%), Gaps = 6/241 (2%)

Query: 64  WIA--ENLATDRRTLAMSKKADHILGTTRMGRDVWSQVAYGARVSLAVGFGAGITVCFLA 121
           WI   +  A+D         + H  GT ++GRDV+S+V  GAR  L +   A +      
Sbjct: 48  WIVRIDPYASDPLNSLTPPDSTHWFGTDQLGRDVFSRVIVGARDILTIAPLATLLGTIAG 107

Query: 122 TVIGVSAGYFGGKIDDFLTAAMNIMLVIPQYPLLFVLAAFIGEAGPLTIALIIGCTSWAW 181
           T +G+  GYF G +D+ +  A++ +L +P   +  +  A +G A   T+ L+IG T    
Sbjct: 108 TTLGLIVGYFEGWVDNVVGRAIDAVLALPLVIVALLALAAVG-ASNFTVILVIGITFTPI 166

Query: 182 GARVVRSQTMALREKEFVKAAEVLGESSWRIIFIEILPNLISIVGASFIGSVMYAIMMEA 241
            AR VR+   A R  ++V AA++ GE +  I+F EILPN++  +       + YAI   A
Sbjct: 167 TARTVRAAVFAERHLDYVAAAQLRGERAPYIMFAEILPNVLPPIIVEATVRLGYAIFAVA 226

Query: 242 TISFLGLG-DPNTISWGIMLYNVQTSSSMLIGAWWELLAPCLSLTLLVTGLALLNFAVDE 300
           T+SFLG G  P +  WG+ L   ++ + M  GAWW ++    ++  LV G+ L+  +V  
Sbjct: 227 TLSFLGFGIQPPSADWGLAL--SESYTLMAGGAWWTVVFAAGAIASLVVGVNLIADSVQG 284

Query: 301 I 301
           +
Sbjct: 285 V 285