Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., oligopeptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  239 bits (611), Expect = 5e-68
 Identities = 126/299 (42%), Positives = 179/299 (59%), Gaps = 4/299 (1%)

Query: 4   PLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPA 63
           P+I +RNL VD+ +  G V A ++VS  + PGE+ G+ GESG GKS    ++  L + P 
Sbjct: 7   PVIEVRNLRVDFPSRRGTVTALSDVSLSIRPGEILGVVGESGAGKSMTGLAIQGLLEAPG 66

Query: 64  FITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTN 123
            I GGEV      I    D  M+  R +E+  +FQ  + +LNP+ ++  Q  + I RH  
Sbjct: 67  HIAGGEVWLGKRRIDTLDDRAMEKIRGREIGAIFQDPLTSLNPLFSVGAQLVETIRRHLG 126

Query: 124 MTREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEP 180
             + +A+ RA  LL  V I PS   R+N YPHQFSGGMRQR+VIA+ALA +PK++I DEP
Sbjct: 127 FGKAEARARAVQLLRDVGI-PSPEERVNQYPHQFSGGMRQRVVIALALAASPKLVIADEP 185

Query: 181 TTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQ 240
           TTALDV +Q +I+  +  L +E   +++ +THD+ ++ E +DRI +MY+G LIE+   +Q
Sbjct: 186 TTALDVSIQAQIISLLRKLCKEKQTAVMLVTHDMGVIAEAADRIAVMYAGRLIEIGAVEQ 245

Query: 241 ILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTK 299
           +L  P HPYT+GL  S P L     +L  I G+   L  IP GC F  RC      C +
Sbjct: 246 VLHQPRHPYTQGLMGSIPSLGARVERLNQIDGSMPRLDAIPDGCAFNPRCKMAGPRCRR 304