Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  243 bits (621), Expect = 4e-69
 Identities = 136/325 (41%), Positives = 199/325 (61%), Gaps = 5/325 (1%)

Query: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64
           L+ +R+L V + ++ G VRA + VSF +   E+ GL GESG GK+    SLM L   P  
Sbjct: 8   LLDVRDLRVSFRSERGLVRAVDGVSFSVGRQEIVGLVGESGSGKTQTLLSLMGLIDDPNA 67

Query: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124
           I  GEV F GED+L+   + +QA R  +++M+FQ  M +L PV  + +Q  + I  H   
Sbjct: 68  IVEGEVRFLGEDLLRLPRKALQALRGGKIAMIFQDPMTSLTPVHRVGDQIVEQILAHKGG 127

Query: 125 TREQAKRRAEGLLEIVDI-HPSRL-NDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTT 182
           +R  A+ +A  LLE V I +P+ +   YPH+ SGGMRQR++IA+AL+ +P +++ DEPTT
Sbjct: 128 SRRAARDKALALLEAVRIANPTAVVARYPHELSGGMRQRVLIAMALSCDPALLLADEPTT 187

Query: 183 ALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQIL 242
           ALDV VQ +IL  I  L+ +F  S++ +THDL ++ E +DR+ +MY G ++E     ++ 
Sbjct: 188 ALDVTVQAQILDLIGRLRGDFASSVILVTHDLGVVAEVADRVLVMYGGRVVEEGLMDEVF 247

Query: 243 ETPYHPYTKGLGSSFPPLTGPK-TKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTKVP 301
             P HPYT GL  S PPL GP+  +L  IPGNP  L  +P GC F  RC    +AC+  P
Sbjct: 248 RDPLHPYTWGLFDSIPPLEGPRPRRLRSIPGNPPTLSSLPPGCAFGPRCRCRFDACSISP 307

Query: 302 TVLRQIEHGRFSNCHLYTQSNATIK 326
            V R + + RF+ C+L     AT++
Sbjct: 308 PVQR-LGNRRFA-CYLSASQRATLR 330