Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  244 bits (624), Expect = 2e-69
 Identities = 133/330 (40%), Positives = 190/330 (57%), Gaps = 17/330 (5%)

Query: 4   PLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPA 63
           PL+ + NL V +      + A N+VSF LA GE  GL GESG GKS   FS++ L   P 
Sbjct: 3   PLLDVSNLTVKFALRDTALTAVNDVSFTLAKGERLGLVGESGAGKSVTGFSILNLVSKPG 62

Query: 64  FITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTN 123
           FI GG V+F G+D+ +   E ++  R   +SM+FQ  M  LNPVLT+  Q  + I  H  
Sbjct: 63  FIAGGSVLFEGKDLTRADAETLRDIRGNRISMIFQDPMMTLNPVLTVGTQMIETILAHKK 122

Query: 124 MTREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEP 180
           +TR++A+  A   L  V I PS   RL  YPH+FSGGMRQR+VIAIAL  +P +II DEP
Sbjct: 123 VTRKEAEAIALDKLRKVYI-PSPERRLAQYPHEFSGGMRQRIVIAIALLTSPSLIIADEP 181

Query: 181 TTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQ 240
           TTALDV +Q EI+  +  L +     ++ ITHDL ++ + + +I +MY+G ++E+  +  
Sbjct: 182 TTALDVTIQAEIMDLLLELCQSEDMGLILITHDLGVVSQVTQKIAVMYAGGIVEMGDTAM 241

Query: 241 ILETPYHPYTKGLGSSFP-----------PLTGPKT--KLTGIPGNPLNLLDIPQGCRFQ 287
           ++  P HPYT+GL  + P            +  P+   +L  IPG+  +L D+P+GC F 
Sbjct: 242 VVGEPLHPYTRGLLGALPQCADKADCGLEDVAAPRVRRRLNQIPGSMPSLSDVPRGCPFN 301

Query: 288 ARCDRVHEACTKVPTVLRQIEHGRFSNCHL 317
            RC+     CT    +L     GR + CH+
Sbjct: 302 NRCELCETVCTTTRPLLEVKSDGRMAACHM 331