Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., oligopeptide ABC transporter ATP-binding protein OppD from Klebsiella michiganensis M5al

 Score =  241 bits (614), Expect = 2e-68
 Identities = 127/313 (40%), Positives = 187/313 (59%), Gaps = 4/313 (1%)

Query: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64
           L+ +++L V + T  GDV A N+++F+L  GE  G+ GESG GKS  AF+LM L      
Sbjct: 19  LLDVKDLRVTFGTPDGDVTAVNDLNFNLRAGETLGIVGESGSGKSQTAFALMGLLAANGR 78

Query: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124
           I GG   FNG+ IL   +  +   R +++SM+FQ  M +LNP + + EQ  +V+  H  +
Sbjct: 79  I-GGSATFNGKQILNLPERELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKAL 137

Query: 125 TREQAKRRAEGLLEIVDIHPSR--LNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPTT 182
           ++ +A   +  +L+ V +  +R  +  YPH+FSGGMRQR++IA+AL   PK++I DEPTT
Sbjct: 138 SKAEAFEESVKMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTT 197

Query: 183 ALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQIL 242
           ALDV VQ +I+  +  LK EF  +I+ ITHDL ++    D++ +MY+G  +E   ++ + 
Sbjct: 198 ALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGQARDVF 257

Query: 243 ETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACTKVPT 302
             P HPY+ GL ++ P L      L  IPGNP NLL +P+GC FQ RC    E C   P 
Sbjct: 258 YQPSHPYSIGLLNAVPRLDAEGDALLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNSAPP 317

Query: 303 VLRQIEHGRFSNC 315
            L +   GR   C
Sbjct: 318 -LEEFAPGRLRAC 329