Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  233 bits (593), Expect = 6e-66
 Identities = 132/324 (40%), Positives = 183/324 (56%), Gaps = 12/324 (3%)

Query: 5   LISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHKPPAF 64
           L+ ++NL V +      + A N+VSF L  GE  GL GESG GKS   FS++ L   P F
Sbjct: 4   LLDVQNLTVKFALRDEALTAVNDVSFTLGRGERLGLVGESGAGKSVTGFSIINLISKPGF 63

Query: 65  ITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITRHTNM 124
           I GG V+F G D++    E ++  R   +SM+FQ  M  LNPVLT+  Q  + I  H  M
Sbjct: 64  IAGGSVLFEGNDLVTTDAETLRDIRGNRISMIFQDPMMTLNPVLTIGSQMVETILAHQKM 123

Query: 125 TREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMDEPT 181
           +R +A+  A   L  V I PS   RL  YPH+FSGGMRQR+VIAIAL  +P +II DEPT
Sbjct: 124 SRREAEEIALDKLRKVYI-PSPEKRLKQYPHEFSGGMRQRIVIAIALLTSPSLIIADEPT 182

Query: 182 TALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPSKQI 241
           TALDV +Q EI+  +  L E     ++ ITHDL ++ + + +I +MY+G ++E+  + +I
Sbjct: 183 TALDVTIQAEIMDLLLELCESEKMGLILITHDLGVVSQVTQKIAVMYAGRIVEMGETARI 242

Query: 242 LETPYHPYTKGLGSSFPP-------LTGPKTKLTGIPGNPLNLLDIPQG-CRFQARCDRV 293
           +  P HPYTKGL ++ P          G + +L  IPG   +L +I  G C F  RC+  
Sbjct: 243 VADPQHPYTKGLLAALPQGNSCGGGCVGKRHRLNQIPGAMPSLSEIAHGICPFHNRCELC 302

Query: 294 HEACTKVPTVLRQIEHGRFSNCHL 317
            + C      L    +G    CHL
Sbjct: 303 QDVCRTSRPRLLPKRNGGLVACHL 326