Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  236 bits (602), Expect = 6e-67
 Identities = 130/317 (41%), Positives = 184/317 (58%), Gaps = 3/317 (0%)

Query: 1   MTTPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHK 60
           MT PL+ + ++ V +      V A N VSF LAPGEV G+ GESG GKS    +L+RL  
Sbjct: 1   MTHPLVEMTDVTVRF-DGTPPVHAVNGVSFKLAPGEVLGILGESGSGKSVTLKTLLRLLP 59

Query: 61  PPAFITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITR 120
                 GG+V  +G+D+L  +   +   R   +SM+FQ    AL+PV T+ +Q  + + R
Sbjct: 60  EKKTRIGGQVRVDGQDVLALNGRALADHRGGVVSMIFQDPALALDPVYTIGQQIAESVVR 119

Query: 121 HTNMTREQAKRRAEGLLEIVDIHPS--RLNDYPHQFSGGMRQRLVIAIALALNPKMIIMD 178
           H  +++  A  RA  +LE+V I  +  RL  YPH+ SGGMRQR +IA+ALA  PK+++ D
Sbjct: 120 HEGLSQRDAMARALEMLELVRIPSAKRRLKAYPHEMSGGMRQRAMIALALACKPKLLLAD 179

Query: 179 EPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAPS 238
           EPTTALD  VQ ++L  +  L++E G  ++F+THD+ + VE SDR+ +MY+G  +E    
Sbjct: 180 EPTTALDATVQIQVLLLLRELQKEMGMGVIFVTHDIGVAVEVSDRLAVMYAGSFVETGSV 239

Query: 239 KQILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEACT 298
            +I+    HPYTKGL ++      P T L  IPG P  L   P GC F  RCDR  EAC 
Sbjct: 240 AEIIRDGRHPYTKGLLAANLVGAEPGTPLEAIPGAPPALHAPPVGCAFAPRCDRAREACA 299

Query: 299 KVPTVLRQIEHGRFSNC 315
             P  +      R++ C
Sbjct: 300 SDPLPVWTQGPDRWARC 316