Pairwise Alignments

Query, 327 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  242 bits (618), Expect = 8e-69
 Identities = 128/300 (42%), Positives = 182/300 (60%), Gaps = 4/300 (1%)

Query: 1   MTTPLISIRNLCVDYITDAGDVRACNNVSFDLAPGEVFGLAGESGCGKSTVAFSLMRLHK 60
           M+TP +S++NL   + T AG  +A ++ SFD+APGE+ GL GESG GKS   FS++ L  
Sbjct: 1   MSTPTLSVQNLRTHFFTGAGVAKAVDDTSFDVAPGEIVGLVGESGSGKSITGFSVLGLID 60

Query: 61  PPAFITGGEVIFNGEDILKYSDERMQAFRWKEMSMVFQSAMNALNPVLTMEEQFCDVITR 120
            P  I  G V+F GED+   + E ++  R   ++M+FQ  M  LNPVL ++ Q  + +  
Sbjct: 61  APGRIVAGRVLFKGEDLTTLTPEALRRLRGNRIAMIFQDPMMTLNPVLRIDTQMIEAVQA 120

Query: 121 HTNMTREQAKRRAEGLLEIVDIHPS---RLNDYPHQFSGGMRQRLVIAIALALNPKMIIM 177
           HT +++  A++RA   L  V I PS   RL  YPHQ SGGMRQR+ IAIAL  +P++II 
Sbjct: 121 HTRVSKHAARQRARDALASVGI-PSPDERLRAYPHQLSGGMRQRVAIAIALLHDPELIIA 179

Query: 178 DEPTTALDVVVQREILQKIYALKEEFGFSILFITHDLSLMVEFSDRIGIMYSGELIEVAP 237
           DEPTTALDV +Q +IL ++  L      ++++++HDL+++   +DRI +MY+G ++E   
Sbjct: 180 DEPTTALDVTIQAQILAEMQKLCARSHTAMVWVSHDLAVVAGLADRICVMYAGRVVETGS 239

Query: 238 SKQILETPYHPYTKGLGSSFPPLTGPKTKLTGIPGNPLNLLDIPQGCRFQARCDRVHEAC 297
             +ILE P HPYT GL  S P        LT IPG   + L +P GC F  RC      C
Sbjct: 240 VDEILERPRHPYTIGLIDSLPEKARRGESLTQIPGMAPSALKLPVGCAFAPRCVYATSLC 299