Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  195 bits (496), Expect = 1e-54
 Identities = 114/327 (34%), Positives = 189/327 (57%), Gaps = 15/327 (4%)

Query: 7   ELLVEGKNLVKDFAINSNALK-QPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIA 65
           ++ +E  ++ ++F+I+    K    ++A++ VS ++ +   L +VGESG GKST AKM+ 
Sbjct: 16  DIALELCDIRREFSISRGFFKPDATLKAVDGVSLRLMRGETLGLVGESGCGKSTLAKMLL 75

Query: 66  KMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLI 125
            + AP+SG +   G+ +    +  D       +Q ++QDP+ SLNP  T+   +  PL++
Sbjct: 76  GLLAPSSGDVLVNGKHL----AGTDRKEMARRIQPIFQDPYSSLNPRKTLREIVTLPLIV 131

Query: 126 HKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVV 185
           H   TP  +++   R   +++ VGL  PK     YP QLSGGQRQRV +AR + +  +V+
Sbjct: 132 HGIGTPAERRQ---RAEAMMDVVGL--PKRVIDSYPSQLSGGQRQRVAIARALVMRPDVL 186

Query: 186 LADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEW 245
           + DEPTS LDVS++A +LNL++++K E  ++ L I+H++A   ++A+ +AVMY+G +VE 
Sbjct: 187 ICDEPTSALDVSVQAQILNLLQDLKQEFGLTYLLISHNLAVIEHLADRVAVMYLGRIVEE 246

Query: 246 GDTDEIIHDPQHPYTKLLVSAV--PDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLY 303
              + +   P HPYT+ L+ +V  PDP   I +   G  G  P       GC F  RC  
Sbjct: 247 RSRESLFARPGHPYTQALLDSVLTPDPHLGIPDL--GLHGTFPNPMSPPSGCAFHPRCPA 304

Query: 304 ASAKCREALPEVTQLSDNHFVRCYLFE 330
               C+E  P + ++ +   VRC+L +
Sbjct: 305 CMPVCKEKAPAIGRM-EGGTVRCHLHD 330