Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  201 bits (510), Expect = 5e-56
 Identities = 108/277 (38%), Positives = 177/277 (63%), Gaps = 10/277 (3%)

Query: 9   LVEGKNLVKDFAINSNALK--QPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAK 66
           ++E   L K F + S      +  + A+ +VSF +     L++VGESG GKSTT + + +
Sbjct: 323 VLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMR 382

Query: 67  MYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIH 126
           +  P+ G++   G D+  + S+++L H R  +QM++QDP+ SLNP   I   IA PLLI+
Sbjct: 383 LVEPSGGLVLLDGVDVLKL-SQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLIN 441

Query: 127 KKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVL 186
            K   G + E+ ++V ELL++VGL P  A   ++PH+ SGGQRQR+ +AR +A+  ++++
Sbjct: 442 GK---GGQSEVADKVAELLQKVGLSPDMAK--RFPHEFSGGQRQRICIARALALEPKLIV 496

Query: 187 ADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWG 246
           ADE  S LDVS+++ V+NLM +++    ++ L+I+HD+A    ++  +AVMY+G +VE G
Sbjct: 497 ADEAVSALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAG 556

Query: 247 DTDEIIHDPQHPYTKLLVSAVP--DPKKSIHEKLEGN 281
             + I  +PQHPYT+ L+SAVP  DP + + ++   N
Sbjct: 557 SREAIFQNPQHPYTRRLLSAVPIADPARRLQKRTVSN 593



 Score =  167 bits (422), Expect = 8e-46
 Identities = 92/239 (38%), Positives = 144/239 (60%), Gaps = 7/239 (2%)

Query: 34  INDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTS----GVIEYKGRDIQDIVSRD 89
           +  VSF +     ++VVGESGSGKS TA  I ++ +P      G ++  G+++  +   +
Sbjct: 47  VQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDAE 106

Query: 90  DLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLEQVG 149
                   + M++Q+P  SLNP  TI   IA  L++H+ ++   + + E     LLE+V 
Sbjct: 107 MRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGLS---RAQAENETIRLLEKVR 163

Query: 150 LIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEM 209
           +   K+   +YPH+ SGG RQRV +A  +A   ++++ADEPT+ LDV+I+A +L L++E+
Sbjct: 164 IPAAKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKEL 223

Query: 210 KFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAVP 268
           + E  MS+L+ITHD+     IA+   VMY G  VE   TD+I + P HPYT+ L+SAVP
Sbjct: 224 QQEDGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIFNRPNHPYTRSLLSAVP 282