Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  199 bits (506), Expect = 1e-55
 Identities = 106/271 (39%), Positives = 168/271 (61%), Gaps = 6/271 (2%)

Query: 2   SKPHGELLVEGKNLVKDFAINSNALKQPM-MRAINDVSFKMYKSRGLSVVGESGSGKSTT 60
           ++P G+ ++E KN+ K + ++S    +P  + A+ ++SF +     + +VGESGSGKST 
Sbjct: 273 ARPAGKPILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTV 332

Query: 61  AKMIAKMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIA 120
           A+++  +   + G   + GRD+  +  R  L+ +R  VQMV+QDP+ S+NP  T+F  ++
Sbjct: 333 ARVLLGLNEASGGEALFHGRDVLKM-DRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVS 391

Query: 121 RPLLIHKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAV 180
            P  IHK +    K    +RV ELL  VGL P  A   +YPHQ SGGQRQR+ +AR +A 
Sbjct: 392 EPWRIHKDIL--EKTRWRDRVTELLGLVGLNPEHAK--RYPHQFSGGQRQRIAIARALAC 447

Query: 181 GAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVG 240
             E+V+ DE  S LDVS++  V++L+ E++    ++ ++ITHD+   R+ A+ + VM  G
Sbjct: 448 DPELVVCDEAVSALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSG 507

Query: 241 HMVEWGDTDEIIHDPQHPYTKLLVSAVPDPK 271
            +VE   T+EI  +PQH YT+ L++A P PK
Sbjct: 508 EIVEHATTEEIFRNPQHAYTRQLINATPKPK 538



 Score =  163 bits (413), Expect = 8e-45
 Identities = 98/275 (35%), Positives = 156/275 (56%), Gaps = 20/275 (7%)

Query: 1   MSKPHGELLVEGKNLVKDFAINSNALKQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTT 60
           M+ PH   L+E K+L  DF     A      RA + VSF +     L ++GESGSGKS +
Sbjct: 1   MTGPH---LLEVKDLTVDFLSLGGAF-----RATSGVSFHVDAGETLVILGESGSGKSVS 52

Query: 61  AKMIAKMYAPT-----SGVIEYKGRDIQDIVS--RDDLMHYREGVQMVWQDPFGSLNPTH 113
           A  I  +         +G + Y+GRD+  +    R DL   R  + M++QDP   LNP +
Sbjct: 53  ASAIMGLIDTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRR--IAMIFQDPLSHLNPVY 110

Query: 114 TIFHHIARPLLIHKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVN 173
           TI   +     +H   +     E  +R  E+L +VG+  P+    +YPHQ SGGQRQR+ 
Sbjct: 111 TIGWQLEEVFTVHGVASGA---EARQRAIEILGRVGIPEPEKRIDQYPHQFSGGQRQRIM 167

Query: 174 LARNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAED 233
           +   IA+  E+++ADEPT+ LDVS++A +L L+++++ E  ++++ ITHD+  A  +A+ 
Sbjct: 168 IGMAIALRPEILIADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADR 227

Query: 234 LAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAVP 268
           + VM  G +VE G+   +  +P H YT+ L++A+P
Sbjct: 228 VIVMKSGRIVEEGEARAVFENPAHSYTRTLINALP 262