Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., dipeptide ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  195 bits (495), Expect = 3e-54
 Identities = 106/262 (40%), Positives = 162/262 (61%), Gaps = 8/262 (3%)

Query: 9   LVEGKNLVKDFAINSNALKQPMMR--AINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAK 66
           +++ ++LV  F + S    +   R  A+  VSF ++    L++VGESG GKSTT + + K
Sbjct: 315 ILQVRDLVTRFDLRSGIFNRVTRRVHAVEKVSFDLHPGETLALVGESGCGKSTTGRSLLK 374

Query: 67  MYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIH 126
           +     G I + G+ + DI    +L H R  +Q ++QDP+ SL+P  T+ + I  PLL+H
Sbjct: 375 LVKSQGGTITFNGQTLTDI-GGSELQHLRRDIQFIFQDPYASLDPRLTVGYSIMEPLLVH 433

Query: 127 KKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVL 186
                    E E RV  LLE+VGL+P  A   +YPH+ SGGQRQR+ +AR +A+  +VV+
Sbjct: 434 NLAKGA---EAEARVAWLLEKVGLLPEHAQ--RYPHEFSGGQRQRICIARALALNPKVVI 488

Query: 187 ADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWG 246
           ADE  S LDVSIRA ++NL+ +++ E  ++ L+I+HD+A    I+  +AVMY+G +VE G
Sbjct: 489 ADESVSALDVSIRAQIINLLMDLQKEFGLAFLFISHDMAVVERISHRVAVMYLGQIVEIG 548

Query: 247 DTDEIIHDPQHPYTKLLVSAVP 268
               +   PQH YT+ L++AVP
Sbjct: 549 SRRAVFETPQHAYTRKLMAAVP 570



 Score =  143 bits (361), Expect = 1e-38
 Identities = 82/252 (32%), Positives = 143/252 (56%), Gaps = 13/252 (5%)

Query: 27  KQPMMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEY-------KG 79
           ++ +++A++ +SF++ +   L++VGESGSGKS T+  + ++     G I         + 
Sbjct: 29  ERQVIQAVSHLSFQVKRGETLAIVGESGSGKSVTSLALMRLVEQGGGKISQGEMQLRRRN 88

Query: 80  RDIQDIVSRDD-LMHYREGVQM--VWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKE 136
            +I D+++     M    G  M  ++Q+P  SLNP   +   IA  + +H+     + + 
Sbjct: 89  GEIVDLMNATQPAMRNLRGADMAMIFQEPMTSLNPVFPVGEQIAESIRLHQNK---DHRA 145

Query: 137 LEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDV 196
                  +L+ V +   +     YPHQLSGG RQRV +A  ++    +++ADEPT+ LDV
Sbjct: 146 ARAEALRMLDLVRIPEARNILDSYPHQLSGGMRQRVMIAMALSCKPALLIADEPTTALDV 205

Query: 197 SIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQ 256
           +I+A +L L+  ++ E QM +++ITHD+     IA+ + VM+ G+ VE G+ + I   PQ
Sbjct: 206 TIQAQILQLIRVLQKEMQMGVIFITHDMGVVAEIADRVLVMHQGNSVETGEVNAIFRSPQ 265

Query: 257 HPYTKLLVSAVP 268
            PYT+ L++AVP
Sbjct: 266 APYTQTLLAAVP 277