Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., dipeptide transport ATP-binding protein DppF from Phaeobacter inhibens DSM 17395

 Score =  234 bits (597), Expect = 2e-66
 Identities = 134/342 (39%), Positives = 202/342 (59%), Gaps = 22/342 (6%)

Query: 2   SKPHGELLVEGKNLVKDFAINSNALKQPMMR------------AINDVSFKMYKSRGLSV 49
           SKP    L+E KNL K F ++   L+   +R            A+N+VS    +   L +
Sbjct: 8   SKP----LLELKNLEKRFELDKGFLETIKLRGGRITREKRAVHAVNNVSLSADRGEALCI 63

Query: 50  VGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSL 109
           VGESG GKST A+++A + AP+ G I Y G  I D  SR ++M  R+ +QM++Q+P+ SL
Sbjct: 64  VGESGCGKSTVARLVAGLLAPSGGEIHYDGERIDDR-SRGEMMPLRKKMQMIFQNPYASL 122

Query: 110 NPTHTIFHHIARPLLIHKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQR 169
           NP  TI   +  P+  H      ++ E+ ++V E++  VG+ P  + +++YPH+ SGGQR
Sbjct: 123 NPRMTIQQALEEPVRHHNPSL--SRGEVRDKVSEVMRSVGVDP--SWSSRYPHEFSGGQR 178

Query: 170 QRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARY 229
           QR+ +AR + V  E ++ADEP S LDVSI+A VLNLM E K +R ++  +ITHD++   +
Sbjct: 179 QRIAIARALTVDPEFIIADEPISALDVSIQAQVLNLMLEAKDQRGLTYFFITHDLSVVEH 238

Query: 230 IAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWT 289
               +AV+Y+G + E  DT  +  +P+HPYTK L+SAVP  K      +   +GEIP   
Sbjct: 239 FGTRVAVLYLGTLCELADTQTLFENPKHPYTKALLSAVPQLKDQGQNHIR-LQGEIPTPI 297

Query: 290 PNSVGCPFAGRCLYASAKCREALPEVTQLSDNHFVRCYLFEK 331
               GCPF  RC +A+A+CRE+ P   + +D   V C+  E+
Sbjct: 298 NLPQGCPFQTRCAFANARCRESRPRPLRQADGSTVACHAVEE 339