Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., oligopeptide ABC transporter, ATP binding protein from Phaeobacter inhibens DSM 17395

 Score =  217 bits (552), Expect = 4e-61
 Identities = 126/307 (41%), Positives = 185/307 (60%), Gaps = 8/307 (2%)

Query: 27  KQP--MMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIEYKGRDIQD 84
           KQP   +RA+N VS  + K   L VVGESG GKST A+ I ++Y P  G I + G+DI  
Sbjct: 27  KQPGRAVRALNGVSLALQKGETLGVVGESGCGKSTLARCIVRLYQPQGGSIRHHGQDIFA 86

Query: 85  IVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEERVYEL 144
             +R D   Y   VQM++QDP+ SLNP  T    ++  L +HK + P +  E+  RV EL
Sbjct: 87  EGARRD-RSYNRRVQMMFQDPYSSLNPRMTCGQILSEALHVHK-MRPAD--EIPARVEEL 142

Query: 145 LEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAGVLN 204
           LE V L  P   A K PH+ SGGQRQR+ +AR +AV  EV++ADE  S LDVS++A V+N
Sbjct: 143 LELVRL--PADAAQKLPHEFSGGQRQRIAIARALAVEPEVLIADELVSALDVSVQAQVVN 200

Query: 205 LMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTKLLV 264
           L+ E++ +  +++L++ HD+   R+++  +AV+Y+G +VE GD++ +  +P HPY++ L+
Sbjct: 201 LLLELQEQLDLTILFVAHDLRLVRHVSHRVAVIYLGRIVEIGDSETLFANPAHPYSQALL 260

Query: 265 SAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSDNHFV 324
           SA P             +GE+P       GCPF  RC +A+  CR  +P +  L D   V
Sbjct: 261 SAAPSLDPDDTGDAIRLEGELPSPLNVPPGCPFHVRCAHAADVCRRDVPRLRPLGDRGEV 320

Query: 325 RCYLFEK 331
            C+L E+
Sbjct: 321 ACHLAEE 327