Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  214 bits (544), Expect = 6e-60
 Identities = 118/313 (37%), Positives = 185/313 (59%), Gaps = 8/313 (2%)

Query: 19  FAINSNALKQPM--MRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIE 76
           F I     K+ +  ++A++ VS ++ + R L++VGESG GK+T  K + ++  P +G + 
Sbjct: 361 FPIRKGLFKRTVGHVKAVDGVSLELQRGRTLALVGESGCGKTTAGKAVLRLL-PATGSVR 419

Query: 77  YKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKE 136
             GR++  +  R+ L   R  +QMV+QDPF SLNP  T+   I   +   +     ++ E
Sbjct: 420 LDGRELLGLPERE-LKPLRRRMQMVFQDPFASLNPRLTVGEIIEEGMTALR--VAASRDE 476

Query: 137 LEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDV 196
               +  LLE VGL  P     +YPH+ SGGQRQR+ +AR +AV  E+++ DEPTS LDV
Sbjct: 477 RRAALAALLESVGL--PAEALGRYPHEFSGGQRQRIAIARALAVQPELLVCDEPTSALDV 534

Query: 197 SIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQ 256
           S++A +LNL+  ++ E  ++ L+ITH+ A   Y+A D+AVMY+G +VE G   +++  P 
Sbjct: 535 SVQAQILNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQQVLAAPC 594

Query: 257 HPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVT 316
           HPYT+ L+SAVP+P+ +   ++    GE P       GC F  RC  AS +CR+  P  +
Sbjct: 595 HPYTRALLSAVPEPRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQASERCRQEYPAPS 654

Query: 317 QLSDNHFVRCYLF 329
             +    VRC+L+
Sbjct: 655 TQAGGVVVRCHLY 667



 Score =  166 bits (420), Expect = 2e-45
 Identities = 109/306 (35%), Positives = 162/306 (52%), Gaps = 16/306 (5%)

Query: 30  MMRAINDVSFKMYKSRGLSVVGESGSGKSTTAKMIAKMYAPTSGVIE-----YKGRDIQD 84
           ++ A++ VSF +      +++GESG GKS TA  + ++  P +G I+      +G +I  
Sbjct: 20  VLTAVDGVSFAVAPGETFALLGESGCGKSATALALLRLL-PNAGRIQGGEVWLEGEEI-- 76

Query: 85  IVSRDDLMHYREG--VQMVWQDPFGSLNPTHTIFHHIARPLLIHKKVTPGNKKELEER-V 141
           +   +  M  R G    M++Q+P  SLNP  TI   I   L  H+    G K E   R  
Sbjct: 77  LALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIGESLERHR----GMKGEAARREA 132

Query: 142 YELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNIAVGAEVVLADEPTSMLDVSIRAG 201
             LL  VG+  P+    +YP QLSGG +QR  +A  +A    +++ADEPT+ LDV+I+A 
Sbjct: 133 LALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEPRLLIADEPTTALDVTIQAQ 192

Query: 202 VLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMYVGHMVEWGDTDEIIHDPQHPYTK 261
           +L+L+  ++ ER M +L ITHD+      A  + VMY G +VE     E    P+HPYT+
Sbjct: 193 ILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEIVETAPRQEFFASPRHPYTQ 252

Query: 262 LLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFAGRCLYASAKCREALPEVTQLSDN 321
            L +A+PD  +    +L    G++P       GC FA RC  A  +CR   P  T+L   
Sbjct: 253 KLFAALPDLGQR-GAQLATIPGQVPGLAAMPAGCRFAPRCPVAMDRCRLESPGWTELEAG 311

Query: 322 HFVRCY 327
           H VRC+
Sbjct: 312 HQVRCH 317