Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  209 bits (532), Expect = 8e-59
 Identities = 122/332 (36%), Positives = 188/332 (56%), Gaps = 13/332 (3%)

Query: 1   MSKPHGELLVEGKNLVKDFAINSNAL--KQPMMRAINDVSFKMYKSRGLSVVGESGSGKS 58
           M  P   LL+  ++L K F + S+ L  ++  + A++ V+F + K + L +VGESG GKS
Sbjct: 14  MGGPAQPLLIV-RDLKKHFPVRSSPLDRERKFVHAVDGVNFSVPKGKTLGIVGESGCGKS 72

Query: 59  TTAKMIAKMYAPTSGVIEYKGRDIQDIVSRDDLMHYREGVQMVWQDPFGSLNPTHTIFHH 118
           TTA+++A++    +G + + G  +++      L  +R  +QMV+QD F SLNP  TI   
Sbjct: 73  TTARLVARLMPADAGELIFDGEGVEEFRGLR-LKEFRRNLQMVFQDSFASLNPRLTIAET 131

Query: 119 IARPLLIHKKVTPGNKKELEERVYELLEQVGLIPPKATAAKYPHQLSGGQRQRVNLARNI 178
           IA    +H           + +  ELL++VGL  P   A +YPH+LSGGQRQRVN+AR +
Sbjct: 132 IAYGPRVH------GIARADHQARELLDRVGL-DPSHFAGRYPHELSGGQRQRVNIARAL 184

Query: 179 AVGAEVVLADEPTSMLDVSIRAGVLNLMEEMKFERQMSLLYITHDIATARYIAEDLAVMY 238
           A    +V+ DE  + LD S++A VLNL++E+K ERQ++ L+I+HD+    Y+++ + VMY
Sbjct: 185 AFDPRLVILDEAVAALDKSVQAQVLNLLQELKAERQLTYLFISHDLHVVHYLSDYVMVMY 244

Query: 239 VGHMVEWGDTDEIIHDPQHPYTKLLVSAVPDPKKSIHEKLEGNKGEIPLWTPNSVGCPFA 298
           +G ++E G  + I   P HPYT+ L+SAVP        +     G+ P       GC F 
Sbjct: 245 LGQVIESGPVERIYGQPAHPYTRALLSAVPSMDPEHRTQASPLAGDPPNPINPPSGCRFR 304

Query: 299 GRCLYASAKCREALPEVTQLS--DNHFVRCYL 328
            RC +A A C  A P +  +     H   C+L
Sbjct: 305 DRCPHAHAVCASATPALRDMGRHSEHLAACHL 336